miRBase entry: bta-mir-219b

Stem-loop bta-mir-219b


Accession
MI0032929
Description
Bos taurus bta-mir-219b precursor miRNA

Literature search
4 open access papers mention bta-mir-219b
(6 sentences)

Sequence

197 reads, 20 reads per million, 39 experiments
agagcucagccacagauguccagccacaauucucgguuggccgcagacucguacaAGAAUUGCGUUUGGACAAUCAGUggcgaagcuc
.(((((..(((((.(((((((((.(.((((((((((((.......))).))....))))))).).)))))).))).)))))..)))))

Structure
a     ca     a   -      c a       ----  -   gg 
 gagcu  gccac gau guccag c caauucu    cg guu  c
 |||||  ||||| ||| |||||| | |||||||    || |||  c
 cucga  cggUG CUA CAGGUU G GUUAAGA    gc cag  g
-     ag     A   A      U C       acau  u   ac 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr11: 99257288-99257375 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from bta-mir-219b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-219b-3p

Accession MIMAT0040926
Description Bos taurus bta-miR-219b-3p mature miRNA
Sequence 56 - AGAAUUGCGUUUGGACAAUCAGU - 78
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25458694
    Regulating life or death: potential role of microRNA in rescue of the corpus luteum
    "Maalouf SW, Liu WS, Albert I, Pate JL"
    "Mol Cell Endocrinol (2014) 398:78-88