Stem-loop sequence bta-mir-2285al

Accession

MI0032949 (change log)

Description

Bos taurus miR-2285al stem-loop

Literature search

11 open access papers mention bta-mir-2285al
(15 sentences)

Stem-loop

   -      a   -ac      ug  c       a    agu 
5'  uggguu gcc   aaaguu  uu ggguuuu cugu   a
    |||||| |||   ||||||  || ||||||| ||||    
3'  acccaa cgg   uuucaa  aa cccaaaa ggua   g
   g      c   guu      gu  a       a    cuc 

Deep sequencing

597 reads, 1.67 reads per million, 60 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Btau_5.0.1; GCA_000003205.6): chr18: 5635713-5635792 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0032949

Mature sequence bta-miR-2285al-5p

• Accession: MIMAT0040949
• Sequence: 11 - acaaaguuuguucggguuuua - 31
• Deep sequencing: 310 reads, 28 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:25458694 "Regulating life or death: potential role of microRNA in rescue of the corpus luteum" Maalouf SW, Liu WS, Albert I, Pate JL Mol Cell Endocrinol. 398:78-88(2014).