miRBase entry: gma-MIR10195

Stem-loop gma-MIR10195


Accession
MI0032962
Description
Glycine max gma-MIR10195 precursor miRNA


Sequence

auaguuaucuUAUGAUUUUGUGGAUCAAAGGAggucauucgccaaucuuuauccuauggcuaaagaauuagaguuauccuauggcagcaguggggguaacucuaauuccucaaccauaggauaaagauuggagaauggccuccuuugauacacaugaucauauggaguuggcaua
...((((((((((((((.((((..((((((((((((((((.((((((((((((((((((.....((((((((((((((((.((....))...)))))))))))))))).....)))))))))))))))))).))))))))))))))))..)))).))))))).)))..))))...

Structure
aua    --   -       U    GA                g                  cuaaa                --a  g 
   guua  ucu UAUGAUU UGUG  UCAAAGGAggucauuc ccaaucuuuauccuaugg     gaauuagaguuauccu   ug c
   ||||  ||| ||||||| ||||  |||||||||||||||| ||||||||||||||||||     ||||||||||||||||   ||  
   cggu  agg auacuag acac  aguuuccuccgguaag gguuagaaauaggauacc     cuuaaucucaaugggg   ac a
aua    ug   u       u    au                a                  aacuc                gug  g 


Annotation confidence Not enough data
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Genome context
chr17: 36369753-36369927 [-]

Database links

Mature gma-miR10195

Accession MIMAT0040962
Description Glycine max gma-miR10195 mature miRNA
Sequence 11 - UAUGAUUUUGUGGAUCAAAGGA - 32
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25465409
    An atlas of soybean small RNAs identifies phased siRNAs from hundreds of coding genes
    "Arikit S, Xia R, Kakrana A, Huang K, Zhai J, Yan Z, Valdes-Lopez O, Prince S, Musket TA, Nguyen HT, Stacey G, Meyers BC"
    "Plant Cell (2014) 26:4584-4601