miRBase entry: gma-MIR1446

Stem-loop gma-MIR1446


Accession
MI0032968
Description
Glycine max gma-MIR1446 precursor miRNA

Literature search
1 open access papers mention gma-MIR1446
(1 sentences)

Sequence

auucaacgucUUCUGAACUCUCUCCCUCAAUacucauugcuacagauagaaaauucaguuaaggucuuuuuucguaagaagcucuugaggguugaggguucgaaagacguuuaguu
....((((((((.(((((((((.(((((((..((..((((...(((.(((..............))).)))..))))..))...)))))))..))))))))).)))))))).....

Structure
-auuc        C         -U       -Ua  ca    uac   u   aaauuc 
     aacgucUU UGAACUCUC  CCCUCAA   cu  uugc   aga aga      a
     |||||||| |||||||||  |||||||   ||  ||||   ||| |||       
     uugcagaa gcuugggag  gggaguu   ga  aaug   uuu ucu      g
uugau        a         uu       cuc  ag    -cu   u   ggaauu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature gma-miR1446

Accession MIMAT0040968
Description Glycine max gma-miR1446 mature miRNA
Sequence 11 - UUCUGAACUCUCUCCCUCAAU - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25465409
    An atlas of soybean small RNAs identifies phased siRNAs from hundreds of coding genes
    "Arikit S, Xia R, Kakrana A, Huang K, Zhai J, Yan Z, Valdes-Lopez O, Prince S, Musket TA, Nguyen HT, Stacey G, Meyers BC"
    "Plant Cell (2014) 26:4584-4601