miRBase entry: cgr-mir-574

Stem-loop cgr-mir-574


Accession
MI0033071
Description
Cricetulus griseus cgr-mir-574 precursor miRNA

Literature search
1 open access papers mention cgr-mir-574
(36 sentences)

Sequence

15375 reads, 158 reads per million, 6 experiments
ugugcgggcgugugagugugugugugugagugugugucgcuccgugucCACGCUCAUGCACACACCCACAcgcccgcacgccgg
.(((((((((((((.(.(((((((((((((((((.(.(((...))).)))))))))))))))))))))))))))))))).....

Structure
----u             a u                 u u   u 
     gugcgggcgugug g gugugugugugagugug g cgc  
     ||||||||||||| | ||||||||||||||||| | ||| c
     cacgcccgcACAC C CACACACGUACUCGCAC c gug  
ggccg             - -                 - u   c 


Annotation confidence High
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature cgr-miR-574

Accession MIMAT0041142
Description Cricetulus griseus cgr-miR-574 mature miRNA
Sequence 49 - CACGCUCAUGCACACACCCACA - 70
Evidence not_experimental

References

  1. PubMed ID: 25689160
    Annotation of additional evolutionary conserved microRNAs in CHO cells from updated genomic data
    "Diendorfer AB, Hackl M, Klanert G, Jadhav V, Reithofer M, Stiefel F, Hesse F, Grillari J, Borth N"
    "Biotechnol Bioeng (2015) 112:1488-1493