Stem-loop sequence egr-mir-133

AccessionMI0033114 (change log)
DescriptionEchinococcus granulosus miR-133 stem-loop
Literature search

1 open access papers mention egr-mir-133
(1 sentences)

Stem-loop 
   -ca  -a     a  u      cu     aagcugu 
5'    ag  ggcug uu gugggg  cagaa       a
      ||  ||||| || ||||||  |||||       a
3'    uc  ccgac aa uacccc  guuuu       a
   acg  cg     c  u      ug     caaaagu
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (ASM52419v1; GCA_000524195.1) Overlapping transcripts
APAU02000107.1: 129469-129541 [+]
intergenic
Database links

Mature sequence egr-miR-133-5p

Accession MIMAT0041195
Sequence

6 -  

ggcugauuuguggggcucagaa

 - 27

Get sequence
Evidence experimental; Illumina [1-2]

Mature sequence egr-miR-133-3p

Accession MIMAT0041196
Sequence

47 -  

uugguccccauuaaccagccgc

 - 68

Get sequence
Evidence experimental; Illumina [1-2]

References

1
PMID:25168356 "Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus" Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S BMC Genomics. 15:736(2014).
2
PMID:25656283 "microRNA profiling in the zoonotic parasite Echinococcus canadensis using a high-throughput approach" Macchiaroli N, Cucher M, Zarowiecki M, Maldonado L, Kamenetzky L, Rosenzvit MC Parasit Vectors. 8:83(2015).