miRBase entry: aga-mir-2944a-1

Stem-loop aga-mir-2944a-1


Accession
MI0033336
Description
Anopheles gambiae aga-mir-2944a-1 precursor miRNA

Literature search
3 open access papers mention aga-mir-2944a-1
(17 sentences)

Sequence

GAAGGAACUUCUGCUGUGAUCUgaguuaggaucaUAUCACAGUAGUUGUACUUUAA
.((((.((..((((((((((.(((.......))).))))))))))..)).))))..

Structure
-G    A  UU          C   gu 
  AAGG AC  CUGCUGUGAU Uga  u
  |||| ||  |||||||||| |||  a
  UUUC UG  GAUGACACUA acu  g
AA    A  UU          U   ag 


Annotation confidence Not enough data
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Genome context
chr3R: 43008879-43008934 [-]
Clustered miRNAs
3 other miRNAs are < 10 kb from aga-mir-2944a-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature aga-miR-2944a-5p

Accession MIMAT0041503
Description Anopheles gambiae aga-miR-2944a-5p mature miRNA
Sequence 1 - GAAGGAACUUCUGCUGUGAUCU - 22
Evidence experimental
Illumina [1]

Mature aga-miR-2944a-3p

Accession MIMAT0041504
Description Anopheles gambiae aga-miR-2944a-3p mature miRNA
Sequence 35 - UAUCACAGUAGUUGUACUUUAA - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25766668
    The germline of the malaria mosquito produces abundant miRNAs, endo-siRNAs, piRNAs and 29-nt small RNAs
    Castellano L, Rizzi E, Krell J, Di Cristina M, Galizi R, Mori A, Tam J, De Bellis G, Stebbing J, Crisanti A, Nolan T
    BMC Genomics (2015) 16:100