miRBase entry: aga-mir-2944a-2

Stem-loop aga-mir-2944a-2


Accession
MI0033337
Description
Anopheles gambiae aga-mir-2944a-2 precursor miRNA

Literature search
4 open access papers mention aga-mir-2944a-2
(17 sentences)

Sequence

GAAGGAACUUCUGCUGUGAUCUgaguuauagaucaUAUCACAGUAGUUGUACUUUAA
.((((.((..((((((((((.(((........))).))))))))))..)).))))..

Structure
-G    A  UU          C   guu 
  AAGG AC  CUGCUGUGAU Uga   a
  |||| ||  |||||||||| |||    
  UUUC UG  GAUGACACUA acu   u
AA    A  UU          U   aga 


Annotation confidence Not enough data
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Genome context
chr2L: 3537080-3537136 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from aga-mir-2944a-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature aga-miR-2944a-5p

Accession MIMAT0041503
Description Anopheles gambiae aga-miR-2944a-5p mature miRNA
Sequence 1 - GAAGGAACUUCUGCUGUGAUCU - 22
Evidence experimental
Illumina [1]

Mature aga-miR-2944a-3p

Accession MIMAT0041504
Description Anopheles gambiae aga-miR-2944a-3p mature miRNA
Sequence 36 - UAUCACAGUAGUUGUACUUUAA - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25766668
    The germline of the malaria mosquito produces abundant miRNAs, endo-siRNAs, piRNAs and 29-nt small RNAs
    Castellano L, Rizzi E, Krell J, Di Cristina M, Galizi R, Mori A, Tam J, De Bellis G, Stebbing J, Crisanti A, Nolan T
    BMC Genomics (2015) 16:100