Stem-loop sequence aga-mir-2944a-2

Accession

MI0033337 (change log)

Description

Anopheles gambiae miR-2944a-2 stem-loop

Literature search

4 open access papers mention aga-mir-2944a-2
(15 sentences)

Stem-loop

   -g    a  uu          c   guu 
5'   aagg ac  cugcugugau uga   a
     |||| ||  |||||||||| |||    
3'   uuuc ug  gaugacacua acu   u
   aa    a  uu          u   aga 

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (AgamP3; GCA_000005575.1): chr2L: 3537080-3537136 [-]
• Overlapping transcripts:

  intergenic

Clustered miRNAs

< 10kb from aga-mir-2944a-2

• aga-mir-286b: chr2L: 3537482-3537547 [-]
• aga-mir-2944a-2: chr2L: 3537080-3537136 [-]

Database links

• miRBase Tracker:MI0033337

Mature sequence aga-miR-2944a-5p

• Accession: MIMAT0041503
• Sequence: 1 - gaaggaacuucugcugugaucu - 22
• Evidence: experimental; Illumina [1]

Mature sequence aga-miR-2944a-3p

• Accession: MIMAT0041504
• Sequence: 36 - uaucacaguaguuguacuuuaa - 57
• Evidence: experimental; Illumina [1]

References

1. PMID:25766668 "The germline of the malaria mosquito produces abundant miRNAs, endo-siRNAs, piRNAs and 29-nt small RNAs" Castellano L, Rizzi E, Krell J, Di Cristina M, Galizi R, Mori A, Tam J, De Bellis G, Stebbing J, Crisanti A, Nolan T BMC Genomics. 16:100(2015).