miRBase entry: aga-mir-10360

Stem-loop aga-mir-10360


Accession
MI0033351
Description
Anopheles gambiae aga-mir-10360 precursor miRNA


Sequence

UAGUUGAGAAGACGCUGAGCCGCCCcgucuugugcuuggugcuuuagauuuggccguuuggggUGGACUUGGCUUAUCCUGCACUACGG
((((..((.....((((((((((((((...((.(((.(((.......))).)))))..)))))))).)))))).....))..))))...

Structure
---    UG  AAGAC      -        ucu  u   u   gc 
   UAGU  AG     GCUGAG CCGCCCcg   ug gcu ggu  u
   ||||  ||     |||||| ||||||||   || ||| |||  u
   AUCA  UC     CGGUUC GGUggggu   gc cgg uua  u
GGC    CG  CUAUU      A        -uu  -   u   ga 


Annotation confidence Not enough data
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Genome context
chr2R: 52133142-52133230 [-]

Database links

Mature aga-miR-10360-5p

Accession MIMAT0041521
Description Anopheles gambiae aga-miR-10360-5p mature miRNA
Sequence 1 - UAGUUGAGAAGACGCUGAGCCGCCC - 25
Evidence experimental
Illumina [1]

Mature aga-miR-10360-3p

Accession MIMAT0041522
Description Anopheles gambiae aga-miR-10360-3p mature miRNA
Sequence 64 - UGGACUUGGCUUAUCCUGCACUACGG - 89
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25766668
    The germline of the malaria mosquito produces abundant miRNAs, endo-siRNAs, piRNAs and 29-nt small RNAs
    Castellano L, Rizzi E, Krell J, Di Cristina M, Galizi R, Mori A, Tam J, De Bellis G, Stebbing J, Crisanti A, Nolan T
    BMC Genomics (2015) 16:100