miRBase entry: ssc-mir-26b

Stem-loop ssc-mir-26b


Accession
MI0033397
Description
Sus scrofa ssc-mir-26b precursor miRNA

Literature search
12 open access papers mention ssc-mir-26b
(19 sentences)

Sequence

645 reads, 261 reads per million, 11 experiments
cccagUUCAAGUAAUUCAGGAUAGGUUgugugcuguccagCCUGUUCUCCAUUACUUGGCUcggg
((((((.((((((((..(((((((((((.(......))))))))))))..))))))))))).)))

Structure
   -   U        UC           u ug 
ccc agU CAAGUAAU  AGGAUAGGUUg g  c
||| ||| ||||||||  ||||||||||| |   
ggg UCG GUUCAUUA  UCUUGUCCgac c  u
   c   -        CC           - ug 


Annotation confidence Not enough data
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Genome context
chrUScaf756: 56015-56079 [+]

Database links

Mature ssc-miR-26b-5p

Accession MIMAT0041595
Description Sus scrofa ssc-miR-26b-5p mature miRNA
Sequence 6 - UUCAAGUAAUUCAGGAUAGGUU - 27
Evidence experimental
Illumina [1]

Mature ssc-miR-26b-3p

Accession MIMAT0041596
Description Sus scrofa ssc-miR-26b-3p mature miRNA
Sequence 41 - CCUGUUCUCCAUUACUUGGCU - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25230983
    The characteristics of the porcine (Sus scrofa) liver miRNAome with the use of next generation sequencing
    "Pawlina K, Gurgul A, Oczkowicz M, Bugno-Poniewierska M"
    "J Appl Genet (2015) 56:239-252