miRBase entry: ssc-mir-670

Stem-loop ssc-mir-670


Accession
MI0033398
Description
Sus scrofa ssc-mir-670 precursor miRNA


Sequence

9 reads, 27 reads per million, 6 experiments
cugacaucccugaguguauguggugaaccugaauuugccuugggUUUCCUCAUAUUCAUUCAGGAGUGucag
(((((((.((((((((.((((((.((((((((.......)))))))).).))))).)))))))).)))))))

Structure
       c        u     - u        au 
cugacau ccugagug augug g gaaccuga  u
||||||| |||||||| ||||| | ||||||||  u
gacuGUG GGACUUAC UAUAC C UUUggguu  g
       A        U     U C        cc 


Annotation confidence Not enough data
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Genome context
chr2: 20399938-20400009 [-]

Database links

Mature ssc-miR-670

Accession MIMAT0041597
Description Sus scrofa ssc-miR-670 mature miRNA
Sequence 45 - UUUCCUCAUAUUCAUUCAGGAGUG - 68
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25230983
    The characteristics of the porcine (Sus scrofa) liver miRNAome with the use of next generation sequencing
    "Pawlina K, Gurgul A, Oczkowicz M, Bugno-Poniewierska M"
    "J Appl Genet (2015) 56:239-252