miRBase entry: ssc-mir-223

Stem-loop ssc-mir-223


Accession
MI0033408
Description
Sus scrofa ssc-mir-223 precursor miRNA

Literature search
12 open access papers mention ssc-mir-223
(34 sentences)

Sequence

17 reads, 42 reads per million, 8 experiments
ccacgcuccguguauuugacaagcugaguuggacacuccauguaguagagUGUCAGUUUGUCAAAUACCCCaagugcgg
((.((((..(.((((((((((((((......(((((((.........))))))))))))))))))))).)..)))).))

Structure
  a    cc u              gaguug       cau 
cc cgcu  g guauuugacaagcu      gacacuc   g
|| ||||  | ||||||||||||||      |||||||   u
gg guga  C CAUAAACUGUUUGA      CUGUgag   a
  c    aC C              ------       aug 


Annotation confidence Not enough data
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Genome context
chrX: 58752425-58752503 [+]

Database links

Mature ssc-miR-223

Accession MIMAT0041607
Description Sus scrofa ssc-miR-223 mature miRNA
Sequence 51 - UGUCAGUUUGUCAAAUACCCC - 71
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25230983
    The characteristics of the porcine (Sus scrofa) liver miRNAome with the use of next generation sequencing
    "Pawlina K, Gurgul A, Oczkowicz M, Bugno-Poniewierska M"
    "J Appl Genet (2015) 56:239-252