miRBase entry: ssc-mir-375

Stem-loop ssc-mir-375


Accession
MI0033409
Description
Sus scrofa ssc-mir-375 precursor miRNA

Literature search
6 open access papers mention ssc-mir-375
(8 sentences)

Sequence

17 reads, 21 reads per million, 6 experiments
cccccgccccgcgacgagccccucgcacaaaccggaccugagcguUUUGUUCGUUCGGCUCGCGUGAggcagggg
((((.(((.((((.((((((...((.(((((.((........)).))))).))...)))))))))).))).))))

Structure
    c   c    a      ccu  c     c  gac 
cccc gcc cgcg cgagcc   cg acaaa cg   c
|||| ||| |||| ||||||   || ||||| ||    
gggg cgg GUGC GCUCGG   GC UGUUU gc   u
    a   A    -      CUU  U     u  gag 


Annotation confidence Not enough data
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Genome context
chr15: 133957549-133957623 [+]

Database links

Mature ssc-miR-375

Accession MIMAT0041608
Description Sus scrofa ssc-miR-375 mature miRNA
Sequence 46 - UUUGUUCGUUCGGCUCGCGUGA - 67
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25230983
    The characteristics of the porcine (Sus scrofa) liver miRNAome with the use of next generation sequencing
    "Pawlina K, Gurgul A, Oczkowicz M, Bugno-Poniewierska M"
    "J Appl Genet (2015) 56:239-252