miRBase entry: ssc-mir-4331-2

Stem-loop ssc-mir-4331-2


Accession
MI0033415
Description
Sus scrofa ssc-mir-4331-2 precursor miRNA

Literature search
2 open access papers mention ssc-mir-4331-2
(44 sentences)

Sequence

16 reads, 29 reads per million, 6 experiments
agcugUGGCGUAGAUCACAGACACAGCuuggaucugguguugcuguggcugugguguaggccagcagcu
(((((((((.((.(((((((.((((((..............)))))).))))))).)).)))).)))))

Structure
     -    G  G       A      uuggau 
agcug UGGC UA AUCACAG CACAGC      c
||||| |||| || ||||||| ||||||       
ucgac accg au ugguguc gugucg      u
     g    g  g       g      uugugg 


Annotation confidence Not enough data
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Genome context
chr14: 144183485-144183553 [+]

Database links

Mature ssc-miR-4331-5p

Accession MIMAT0037379
Description Sus scrofa ssc-miR-4331-5p mature miRNA
Sequence 6 - UGGCGUAGAUCACAGACACAGC - 27
Evidence experimental
Illumina [3]

References

  1. PubMed ID: 25230983
    The characteristics of the porcine (Sus scrofa) liver miRNAome with the use of next generation sequencing
    "Pawlina K, Gurgul A, Oczkowicz M, Bugno-Poniewierska M"
    "J Appl Genet (2015) 56:239-252