miRBase entry: gma-MIR10411

Stem-loop gma-MIR10411


Accession
MI0033440
Description
Glycine max gma-MIR10411 precursor miRNA


Sequence

uuaaaaaucgUAAUUUUAGACUGAUAUUUUGCCUacaauaucaugcagauauaaauugagcauauugaguauuuagguaagcauaauauauguuuagggguaaauagcauaauuaaggacaauuaagccauuuacaccuaaacauaagcuauacuuuccuaaauaugggauauauauggacugcuuguaugauuuauggauaucacaauaucuuuguaauauuguaggcaagagaucagccuaaaacuugacuacucc
.......(((...((((((.(((((.(((((((((((((((..(((((((((((((((((((((((..(((((((((.(((.(((...((((((((((.((((((.((.(((((......))))).)).)))))).))))))))))...))).))).)))))))))..)))).........)))))....))))))))(((((....)))))))))))))))))))))))))).))))).))))))..))).......

Structure
uuaaaaa   UAA      A     A               ca      --------------        ----     ---------    ga         u   c   aua          g      a  a     aa 
       ucg   UUUUAG CUGAU UUUUGCCUacaauau  ugcaga              uauaaauu    gagca         uauu  guauuuagg aag aua   uauguuuagg guaaau gc uaauu  g
       |||   |||||| ||||| |||||||||||||||  ||||||              ||||||||    |||||         ||||  ||||||||| ||| |||   |||||||||| |||||| || |||||   
       agu   aaaauc gacua agaacggauguuaua  auguuu              guauuuag    uucgu         auag  uauaaaucc uuc uau   auacaaaucc cauuua cg auuaa  g
ccucauc   -uc      c     g               --      cuauaacacuauag        uaug     cagguauau    gg         u   a   cga          a      c  a     ca 


Annotation confidence Not enough data
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Genome context
chr2: 392903-393160 [+]

Database links

Mature gma-miR10411

Accession MIMAT0041648
Description Glycine max gma-miR10411 mature miRNA
Sequence 11 - UAAUUUUAGACUGAUAUUUUGCCU - 34
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25747880
    Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
    "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
    "Plant Cell (2015) 27:546-562