miRBase entry: gma-MIR10407c

Stem-loop gma-MIR10407c


Accession
MI0033442
Description
Glycine max gma-MIR10407c precursor miRNA


Sequence

agugaaaagacgaaaaaccaaaaaaaaauauuauaugacaaauaugucccuauguuggcaauuaaagaugaucacguugguaaucauuucaaugacaaauucgucccucuauguaauguaagcuauuuauuaaugauuacaaaugaaagUUAACAGUCGGAUAUAUUUAUCGCacuuuuuaca
.((((((((..........................(((.((((((((((...(((((((......(((((((.((....)).)))))))....(((......)))...........(((((..((((....)))).))))).......)))))))...)))))))))).)))..)))))))).

Structure
a        acgaaaaaccaaaaaaaaauauuaua   c          cua       -----------------------------------------------------aauuaa       c  g 
 gugaaaag                          uga aaauaugucc   uguuggc                                                           agaugau ac u
 ||||||||                          ||| ||||||||||   |||||||                                                           ||||||| ||  
 cauuuuuc                          GCU UUUAUAUAGG   ACAAUUg                                                           uuuacua ug u
a        ------------------------aC   A          CUG       aaaguaaacauuaguaauuauuuaucgaauguaauguaucucccugcuuaaacaguaac       a  g 


Annotation confidence Not enough data
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Genome context
chr2: 32116342-32116524 [+]

Database links

Mature gma-miR10407c

Accession MIMAT0041650
Description Glycine max gma-miR10407c mature miRNA
Sequence 150 - UUAACAGUCGGAUAUAUUUAUCGC - 173
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25747880
    Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
    "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
    "Plant Cell (2015) 27:546-562