miRBase entry: gma-MIR10424a

Stem-loop gma-MIR10424a


Accession
MI0033463
Description
Glycine max gma-MIR10424a precursor miRNA


Sequence

cauuuuuuuuaguccuugauaaaguagagaauuuuauguuuacuuccuaauaauuuuuucauuuguuauagacuuuugaaaaagauaauaaaaaaugacaaaaaauuaucagggagcaaacaaaaaUUUUCUAAUUUAUUAGGGACUaaaacaagua
.((((.(((((((((((((((((.(((((((((((.(((((.((((((.(((((((((((((((.((((...((((....))))...)))).))))))..))))))))).)))))).)))))))))))))))).))))))))))))))))).)))).

Structure
c    u                 g           a     a      a         --      g    aga    u 
 auuu uuuuaguccuugauaaa uagagaauuuu uguuu cuuccu auaauuuuu  ucauuu uuau   cuuu g
 |||| ||||||||||||||||| ||||||||||| ||||| |||||| |||||||||  |||||| ||||   ||||  
 ugaa aaaaUCAGGGAUUAUUU AUCUUUUaaaa acaaa gaggga uauuaaaaa  aguaaa aaua   gaaa a
a    c                 A           -     c      c         ac      a    aua    a 


Annotation confidence Not enough data
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Genome context
chr7: 14078227-14078383 [+]

Database links

Mature gma-miR10424a

Accession MIMAT0041671
Description Glycine max gma-miR10424a mature miRNA
Sequence 127 - UUUUCUAAUUUAUUAGGGACU - 147
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25747880
    Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
    "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
    "Plant Cell (2015) 27:546-562