miRBase entry: gma-MIR4374c

Stem-loop gma-MIR4374c


Accession
MI0033472
Description
Glycine max gma-MIR4374c precursor miRNA


Sequence

gucuuagaaaaccaggcuuuaaagacgaugcugacgucacgaccgucuuugaagguugacuuucuaagacguugucgacauuagcaccgucuuugaagcuuggcuuucuaagacagucgugaugucagcaccgucuuagaagccugacuuucuaagacguucgugauguCAACACCGUCUUUGAAGCCUGGcuuucuaaga
.(((((((((.((((((((((((((((.((.(((((((((((.((((((.(((((((...(((((((((((.(((.(((((((..((.(((((.(((((...)))))..))))).))..))))))).))).)))))))))))...))))))).)))))).))))))))))).)).)))))))))))))))).)))))))))

Structure
g         a                a  c           c      u       gac           u   c       gc  c     -u     u 
 ucuuagaaa ccaggcuuuaaagacg ug ugacgucacga cgucuu gaagguu   uuucuaagacg ugu gacauua  ac gucuu  gaagc  
 ||||||||| |||||||||||||||| || ||||||||||| |||||| |||||||   ||||||||||| ||| |||||||  || |||||  ||||| u
 agaaucuuu GGUCCGAAGUUUCUGC AC ACuguagugcu gcagaa cuuucag   gaagauucugc acg cuguagu  ug cagaa  uuucg  
-         c                C  A           u      u       ucc           c   a       gc  a     uc     g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr9: 35694869-35695069 [-]

Database links

Mature gma-miR4374c

Accession MIMAT0041680
Description Glycine max gma-miR4374c mature miRNA
Sequence 170 - CAACACCGUCUUUGAAGCCUGG - 191
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25747880
    Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
    "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
    "Plant Cell (2015) 27:546-562