miRBase entry: gma-MIR10437

Stem-loop gma-MIR10437


Accession
MI0033501
Description
Glycine max gma-MIR10437 precursor miRNA


Sequence

cuuuuuuuuuaacagacaauauaguuugaacauuucauccauagccacuaguauauuaugucacaauauuuuaguugaauaauacaccuuagucuuacugccuuuucucauccacgggucuuacagcuacaguauuauucaucuaaaauaucagacuguugugcuuccagaaaaUAUUGUUCAAACAUAUACUGUUuaaaucaaaa
.(((..(((.(((((...((((.(((((((((((((.............((((((.((.(((...(((((((((.((((((((((....((((..((..((((............))))..))..))))..)))))))))).)))))))))..))))).))))))....))))....))))))))))))).))))).)))..))).

Structure
c   uu   u     aca    a         ----    auccauagccacu      u  u   aca         u          accu    cu  cu    uuucu 
 uuu  uuu aacag   auau guuugaaca    uuuc             aguaua ua guc   auauuuuag ugaauaauac    uagu  ua  gccu     c
 |||  ||| |||||   |||| |||||||||    ||||             |||||| || |||   ||||||||| ||||||||||    ||||  ||  ||||      
 aaa  aaa UUGUC   UAUA CAAACUUGU    aaag             ucgugu gu cag   uauaaaauc acuuauuaug    aucg  au  uggg     a
a   cu   u     --A    -         UAUa    ---------accu      u  -   -ac         u          --ac    ac  uc    caccu 


Annotation confidence Not enough data
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Genome context
chr16: 16521961-16522166 [-]

Database links

Mature gma-miR10437

Accession MIMAT0041709
Description Glycine max gma-miR10437 mature miRNA
Sequence 175 - UAUUGUUCAAACAUAUACUGUU - 196
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25747880
    Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
    "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
    "Plant Cell (2015) 27:546-562