miRBase entry: gma-MIR10439

Stem-loop gma-MIR10439


Accession
MI0033503
Description
Glycine max gma-MIR10439 precursor miRNA


Sequence

cuuaaacuggCAGACAGAUAAUGCUAGAGCCcauaaucauuucuugaagaagauagaugaaaagauugacaagaucuauacccaaguaagcacaaaugaugaaagguuacaauaucugucugaaaggaugaaga
.(((..((..((((((((((.((....((((....(((((((((((......((((((...............)))))).......))))...)))))))....)))).)).))))))))))..))..)))...

Structure
--c   aa  gg          A  CUAG    caua       ---    -aagaag      gaaaag 
   uua  cu  CAGACAGAUA UG    AGCC    aucauuu   cuug       auagau      a
   |||  ||  |||||||||| ||    ||||    |||||||   ||||       ||||||      u
   agu  ga  gucugucuau ac    uugg    uaguaaa   gaau       uaucua      u
aga   ag  aa          a  ---a    aaag       cac    gaaccca      gaacag 


Annotation confidence Not enough data
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Genome context
chr18: 16724414-16724547 [+]

Database links

Mature gma-miR10439

Accession MIMAT0041711
Description Glycine max gma-miR10439 mature miRNA
Sequence 11 - CAGACAGAUAAUGCUAGAGCC - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25747880
    Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
    "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
    "Plant Cell (2015) 27:546-562