Stem-loop sequence egr-mir-277b

Accession

MI0033524 (change log)

Description

Echinococcus granulosus miR-277b stem-loop

Literature search

2 open access papers mention egr-mir-277b
(14 sentences)

Stem-loop

   --a        --      g      acg  accc 
5'    gaccagau  uuugca uuuaua   cu    a
      ||||||||  |||||| ||||||   ||     
3'    uuggucua  aaacgu aaauau   ga    c
   gua        ua      -      -ga  aaau 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (ASM52419v1; GCA_000524195.1): APAU02000012.1: 779202-779267 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0033524

Mature sequence egr-miR-277b-5p

• Accession: MIMAT0041734
• Sequence: 1 - agaccagauuuugcaguuua - 20
• Evidence: experimental; Illumina [1]

Mature sequence egr-miR-277b-3p

• Accession: MIMAT0041735
• Sequence: 44 - uaaaugcaaaauaucugguuaug - 66
• Evidence: experimental; Illumina [1]

References

1. PMID:25656283 "microRNA profiling in the zoonotic parasite Echinococcus canadensis using a high-throughput approach" Macchiaroli N, Cucher M, Zarowiecki M, Maldonado L, Kamenetzky L, Rosenzvit MC Parasit Vectors. 8:83(2015).