miRBase entry: sfr-mir-3286

Stem-loop sfr-mir-3286


Accession
MI0033567
Description
Spodoptera frugiperda sfr-mir-3286 precursor miRNA


Sequence

ugaagcccaaaacAACUAUUGGGCACUGCACAGGACuaguuacccgaauauacucUUGUGCGUGUUCUAAUAGUUGUugucggagcuuca
((((((((..((((((((((((((((.((((((((.((..(......)..)).))))))))))).)))))))))))))...)).))))))

Structure
      -  -aa             -   U        C  gu ac 
ugaagc cc   aacAACUAUUGGG CAC GCACAGGA ua  u  c
|||||| ||   ||||||||||||| ||| |||||||| ||  |   
acuucg gg   uUGUUGAUAAUCU GUG CGUGUUcu au  a  c
      a  cug             U   -        c  au ag 


Annotation confidence Not enough data
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Genome context
JQCY02000420.1: 68751-68840 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from sfr-mir-3286
Name Accession Chromosome Start End Strand Confidence




Database links

Mature sfr-miR-3286-5p

Accession MIMAT0041816
Description Spodoptera frugiperda sfr-miR-3286-5p mature miRNA
Sequence 14 - AACUAUUGGGCACUGCACAGGAC - 36
Evidence experimental
Illumina [1]

Mature sfr-miR-3286-3p

Accession MIMAT0041817
Description Spodoptera frugiperda sfr-miR-3286-3p mature miRNA
Sequence 56 - UUGUGCGUGUUCUAAUAGUUGU - 77
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25693181
    Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
    Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
    PLoS One (2015) 10:e0116988