miRBase entry: sfr-mir-10472

Stem-loop sfr-mir-10472


Accession
MI0033572
Description
Spodoptera frugiperda sfr-mir-10472 precursor miRNA


Sequence

uguaugccuUAGAAGCUGUGAUUUUUCGAUAUCuuaauucaugccauaauggacaguaauuuugaUCUUUAGUUGUCAAUUCGGCUUGUucgcauaca
(((((((...(.((((((((((........(((..((((..(((((...))).))..))))..)))........))))...)))))).)..)))))))

Structure
       cuU G      ---    UUUUCGAU   uu    ca  -   u 
uguaugc   A AAGCUG   UGAU        AUC  aauu  ug cca  
|||||||   | ||||||   ||||        |||  ||||  || ||| a
acauacg   U UUCGGC   ACUG        Uag  uuaa  ac ggu  
       -cu G      UUA    UUGAUUUC   uu    ug  a   a 


Annotation confidence Not enough data
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Genome context
JQCY02008688.1: 2469-2566 [+]

Database links

Mature sfr-miR-10472-5p

Accession MIMAT0041826
Description Spodoptera frugiperda sfr-miR-10472-5p mature miRNA
Sequence 10 - UAGAAGCUGUGAUUUUUCGAUAUC - 33
Evidence experimental
Illumina [1]

Mature sfr-miR-10472-3p

Accession MIMAT0041827
Description Spodoptera frugiperda sfr-miR-10472-3p mature miRNA
Sequence 66 - UCUUUAGUUGUCAAUUCGGCUUGU - 89
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25693181
    Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
    Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
    PLoS One (2015) 10:e0116988