miRBase entry: sfr-mir-10477

Stem-loop sfr-mir-10477


Accession
MI0033578
Description
Spodoptera frugiperda sfr-mir-10477 precursor miRNA


Sequence

ggCGACGGCGACCUCUCGCGCCcggcacugggugcaggccauggugcggagCGAGAGGGACUGGGAUGCCA
((((.(((...((((((((..(((.((((.(((....)))..))))))).))))))))..)))...)))).

Structure
-    --A   CGA        GC   g    -g   g 
 ggCG   CGG   CCUCUCGC  Ccg cacu  ggu c
 ||||   |||   ||||||||  ||| ||||  |||  
 CCGU   GUC   GGAGAGCg  ggc gugg  ccg a
A    AGG   -AG        -a   -    ua   g 


Annotation confidence Not enough data
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Genome context
JQCY02000978.1: 11976-12046 [+]

Database links

Mature sfr-miR-10477-5p

Accession MIMAT0041838
Description Spodoptera frugiperda sfr-miR-10477-5p mature miRNA
Sequence 3 - CGACGGCGACCUCUCGCGCC - 22
Evidence experimental
Illumina [1]

Mature sfr-miR-10477-3p

Accession MIMAT0041839
Description Spodoptera frugiperda sfr-miR-10477-3p mature miRNA
Sequence 52 - CGAGAGGGACUGGGAUGCCA - 71
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25693181
    Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
    Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
    PLoS One (2015) 10:e0116988