miRBase entry: sfr-mir-10465-2

Stem-loop sfr-mir-10465-2


Accession
MI0033579
Description
Spodoptera frugiperda sfr-mir-10465-2 precursor miRNA


Sequence

GGGUGCGAGGAUACUGGCCAAUggaaaccuuaucacaCUGGCUUGUAUUCUCGCUGCCC
((((((((((((((.(((((.((((.......)).)).))))).)))))))))).))))

Structure
    -          U     A  -  aa 
GGGU GCGAGGAUAC GGCCA Ug ga  c
|||| |||||||||| ||||| || ||  c
CCCG CGCUCUUAUG UCGGU ac cu  u
    U          U     C  a  au 


Annotation confidence Not enough data
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Genome context
JQCY02002420.1: 21-79 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from sfr-mir-10465-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature sfr-miR-10465-5p

Accession MIMAT0041800
Description Spodoptera frugiperda sfr-miR-10465-5p mature miRNA
Sequence 1 - GGGUGCGAGGAUACUGGCCAAU - 22
Evidence experimental
Illumina [1]

Mature sfr-miR-10465-2-3p

Accession MIMAT0041840
Description Spodoptera frugiperda sfr-miR-10465-2-3p mature miRNA
Sequence 38 - CUGGCUUGUAUUCUCGCUGCCC - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25693181
    Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
    Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
    PLoS One (2015) 10:e0116988