miRBase entry: sfr-mir-316

Stem-loop sfr-mir-316


Accession
MI0033606
Description
Spodoptera frugiperda sfr-mir-316 precursor miRNA


Sequence

aguucuccauaaauuUGUCUUUUUCCGCUUUGCUGcugauaauuaugaucaugucaACAGCAAAGCGAAAAGGUCUCcuuuaugagaacu
(((((((.(((((...(.(((((((.(((((((((.(((((..........))))).)))))))))))))))).)...))))))))))))

Structure
       c     uuU U       C         c     auua 
aguucuc auaaa   G CUUUUUC GCUUUGCUG ugaua    u
||||||| |||||   | ||||||| ||||||||| |||||     
ucaagag uauuu   C GGAAAAG CGAAACGAC acugu    g
       -     cCU U       -         A     acua 


Annotation confidence Not enough data
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Genome context
JQCY02000816.1: 146421-146510 [-]

Database links

Mature sfr-miR-316-5p

Accession MIMAT0041890
Description Spodoptera frugiperda sfr-miR-316-5p mature miRNA
Sequence 16 - UGUCUUUUUCCGCUUUGCUG - 35
Evidence experimental
Illumina [1]

Mature sfr-miR-316-3p

Accession MIMAT0041891
Description Spodoptera frugiperda sfr-miR-316-3p mature miRNA
Sequence 57 - ACAGCAAAGCGAAAAGGUCUC - 77
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25693181
    Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
    Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
    PLoS One (2015) 10:e0116988