miRBase entry: sfr-mir-10506

Stem-loop sfr-mir-10506


Accession
MI0033643
Description
Spodoptera frugiperda sfr-mir-10506 precursor miRNA


Sequence

gcgucuuuucCUGUUUCAGAUCUACAUCUGGCaauggagaacccaUUGGACGAUGUAGUUGUGAAACaggaaaaaacgc
((((.(((((((((((((.(.(((((((...((((((.....))))))...))))))).).))))))))))))).))))

Structure
    c             G U       UGG      a 
gcgu uuuucCUGUUUCA A CUACAUC   Caaugg g
|||| ||||||||||||| | |||||||   |||||| a
cgca aaaaggaCAAAGU U GAUGUAG   GUUacc a
    a             G U       CAG      c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
JQCY02003193.1: 4033-4111 [+]

Database links

Mature sfr-miR-10506-5p

Accession MIMAT0041952
Description Spodoptera frugiperda sfr-miR-10506-5p mature miRNA
Sequence 11 - CUGUUUCAGAUCUACAUCUGGC - 32
Evidence experimental
Illumina [1]

Mature sfr-miR-10506-3p

Accession MIMAT0041953
Description Spodoptera frugiperda sfr-miR-10506-3p mature miRNA
Sequence 46 - UUGGACGAUGUAGUUGUGAAAC - 67
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25693181
    Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
    Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
    PLoS One (2015) 10:e0116988