Stem-loop sequence sly-MIR172d

AccessionMI0033682 (change log)
DescriptionSolanum lycopersicum miR172d stem-loop
Literature search

29 open access papers mention sly-MIR172d
(121 sentences)

Stem-loop 
   -- g g  g                ----    a   auau     c     ua 
5'   c g ug agcaucaucaagauuc    acau gcu    uaggg uuuua  a
     | | || ||||||||||||||||    |||| |||    ||||| |||||  u
3'   g c ac ucguaguaguucuaag    ugua cgg    auccc aaaau  u
   ac g g  g                ggug    g   --gc     a     uu
Get sequence
Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (SL2.50; GCA_000188115.2) Overlapping transcripts
chr5: 63201346-63201448 [+]
intergenic
Database links

Mature sequence sly-miR172d

Accession MIMAT0042008
Sequence

78 -  

ggaaucuugaugaugcugcag

 - 98

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:25218481 "Prediction and characterization of Tomato leaf curl New Delhi virus (ToLCNDV) responsive novel microRNAs in Solanum lycopersicum" Pradhan B, Naqvi AR, Saraf S, Mukherjee SK, Dey N Virus Res. 195:183-195(2015).