Stem-loop sequence mdm-MIR319d

Accession

MI0035606 (change log)

Description

Malus domestica miR319d stem-loop

Literature search

4 open access papers mention mdm-MIR319d
(7 sentences)

Stem-loop

   aauc       uu  -       a  g   ac        u   gca u      -     aaag  -  g 
5'     gaaaggg  gu ugaagua cu ccg  ucauucac caa   c caguag agauu    ga gu u
       |||||||  || ||||||| || |||  |||||||| |||   | |||||| |||||    || ||  
3'     cuuucuc  ua auuuuau ga ggc  aguaagug guu   g gucauc uuuaa    cu ca a
   --cu       cc  c       a  g   ga        u   --a u      g     caga  a  a 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates: MDC016620.357: 18381-18517 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0035606

Mature sequence mdm-miR319d

• Accession: MIMAT0043552
• Sequence: 22 - aacugccgacucauucacuca - 42
• Evidence: experimental; Illumina [1]

References

1. "Identification of apple miRNAs and their potential role in fire blight resistance" Kaja E, Szczesniak MW, Jensen PJ, Axtell MJ, McNellis T, Makalowska I Trees Genet Genomes. 11:812(2014).