Stem-loop sequence mdm-MIR319f

Accession

MI0035622 (change log)

Description

Malus domestica miR319f stem-loop

Literature search

4 open access papers mention mdm-MIR319f
(7 sentences)

Stem-loop

   gaucuua        uur  u     uu          cu      ag  c      uu    -   g  g   ac        u  aa u    a      ga 
5'        gagauagu   ag gagcu  cuucagucca  caugga  gg aaaggg  ugaa uua cu ccg  ucauucau ca  c cagu gaaaug  g
          ||||||||   || |||||  ||||||||||  ||||||  || ||||||  |||| ||| || |||  |||||||| ||  | |||| ||||||  u
3'        uucuguca   uc cucga  gaagucaggu  gugucu  uc uuuucu  acuu aau ga ggc  aguaagug gu  g guca cuuuau  g
   -uguuuc        uuu  c     gg          uc      cu  -      -u    c   a  g   gu        u  aa u    w      ag 

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates: MDC009430.318: 14032-14238 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0035622

Mature sequence mdm-miR319f

• Accession: MIMAT0043568
• Sequence: 22 - gagcuuucuucaguccacuc - 41
• Evidence: experimental; Illumina [1]

References

1. "Identification of apple miRNAs and their potential role in fire blight resistance" Kaja E, Szczesniak MW, Jensen PJ, Axtell MJ, McNellis T, Makalowska I Trees Genet Genomes. 11:812(2014).