Stem-loop sequence mdm-MIR172p

Accession

MI0035671 (change log)

Description

Malus domestica miR172p stem-loop

Literature search

14 open access papers mention mdm-MIR172p
(77 sentences)

Stem-loop

   uugac   c   gu   ug gc ug               a   aug    u    g 
5'      agu guu  uug  g  g  gcaucaucaagauuc cac   caag aacu c
        ||| |||  |||  |  |  ||||||||||||||| |||   |||| |||| u
3'      uca caa  aac  c  c  cguaguaguucuaag gug   guuu uuga a
   -uaua   c   au   gu ua gu               a   aaa    c    a 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates: MDC020608.143: 3762-3877 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0035671

Mature sequence mdm-miR172p

• Accession: MIMAT0043620
• Sequence: 77 - agaaucuugaugaugcugcau - 97
• Evidence: experimental; Illumina [1]

References

1. "Identification of apple miRNAs and their potential role in fire blight resistance" Kaja E, Szczesniak MW, Jensen PJ, Axtell MJ, McNellis T, Makalowska I Trees Genet Genomes. 11:812(2014).