miRBase entry: lja-MIR11101b

Stem-loop lja-MIR11101b


Accession
MI0035813
Description
Lotus japonicus lja-MIR11101b precursor miRNA


Sequence

cucaaaauguuauuccucucauuuuauuCGAGAAACAACAUUUUGGGGG
(((((((((((.((..((((.........)))))).)))))))))))..

Structure
--           a  cc    auu 
  cucaaaauguu uu  ucuc   u
  ||||||||||| ||  ||||   u
  GGGUUUUACAA AA  AGAG   a
GG           C  --    Cuu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature lja-miR11101b-3p

Accession MIMAT0043797
Description Lotus japonicus lja-miR11101b-3p mature miRNA
Sequence 29 - CGAGAAACAACAUUUUGGGGG - 49
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25967282
    micro RNA 172 (miR172) signals epidermal infection and is expressed in cells primed for bacterial invasion in Lotus japonicus roots and nodules
    "Holt DB, Gupta V, Meyer D, Abel NB, Andersen SU, Stougaard J, Markmann K"
    "New Phytol (2015) 208:241-256