Stem-loop lja-MIR11110a

Accession

MI0035834

Description

Lotus japonicus lja-MIR11110a precursor miRNA

Sequence

ggUCUUUAUGUCUUUGAAUGAGGguaaaaaacuuuccaccuucaauuuuauucgcauucaaagacauaaaauc
....((((((((((((((((.((((((((................)))))))).))))))))))))))))...

Structure

ggUC                A        aacuuuc 
    UUUAUGUCUUUGAAUG GGguaaaa       c
    |||||||||||||||| ||||||||        
    aaauacagaaacuuac cuuauuuu       a
-cua                g        aacuucc 

Annotation confidence Not enough data

Genome context

Chr2: 10179918-10179990 [+]

Mature lja-miR11110a-5p

• Accession: MIMAT0043825
• Description: Lotus japonicus lja-miR11110a-5p mature miRNA
• Sequence: 3 - UCUUUAUGUCUUUGAAUGAGG - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25967282
   micro RNA 172 (miR172) signals epidermal infection and is expressed in cells primed for bacterial invasion in Lotus japonicus roots and nodules
   "Holt DB, Gupta V, Meyer D, Abel NB, Andersen SU, Stougaard J, Markmann K"
   "New Phytol (2015) 208:241-256