Stem-loop fhe-mir-36b

Accession

MI0037137

Description

Fasciola hepatica fhe-mir-36b precursor miRNA

Literature search

1 open access papers mention fhe-mir-36b
(1 sentences)

Sequence

ugccuguggguaaugccuguucgguuaguguauauguauaaaucugaucugaccgacuauccgcaucccgaucugaucugagaccucgaaugcgaucgagucgaagauccggaucagggguuugccguugauucggagaucaauacACCACCGGGUAGACAUUCAUCcgcuga
.....((((((((((.(((((((((..((((((...........((((((..((((....(.(((((((((((((((((..(((.((((......)))))))..)))).)))))).))))..))).).....)))))))))))))))).))))))))).)))).))))))...

Structure

ugccu      -    c         ua      auguauaaauc      ga    -cuau c   --    -      -    ga   c    au 
     gugggu aaug cuguucggu  guguau           ugaucu  ccga     c gca  uccc gaucug aucu  gac ucga  g
     |||||| |||| |||||||||  ||||||           ||||||  ||||     | |||  |||| |||||| ||||  ||| ||||   
     cgcCUA UUAC GAUGGGCCA  CAcaua           acuaga  ggcu     g cgu  gggg cuaggc uaga  cug agcu  c
--agu      C    A         -C      -----------      --    uaguu c   uu    a      c    ag   -    ag 

Annotation confidence Not enough data

Genome context

scaffold3316: 118780-118952 [+]

Mature fhe-miR-36b

• Accession: MIMAT0045235
• Description: Fasciola hepatica fhe-miR-36b mature miRNA
• Sequence: 147 - ACCACCGGGUAGACAUUCAUC - 167
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26432296
   The miRnome of Fasciola hepatica juveniles endorses the existence of a reduced set of highly divergent micro RNAs in parasitic flatworms
   "Fontenla S, Dell'Oca N, Smircich P, Tort JF, Siles-Lucas M"
   "Int J Parasitol (2015) 45:901-913