miRBase entry: aae-mir-11893-1

Stem-loop aae-mir-11893-1


Accession
MI0037925
Description
Aedes aegypti aae-mir-11893-1 precursor miRNA

Literature search
1 open access papers mention aae-mir-11893-1
(1 sentences)

Sequence

6281 reads, 322 reads per million, 2 experiments
gaugguaaguagauaaaucagaaagacguuuauaucguuucUUCCUGACUUAUACGCUUACCUc
...(((((((..((((.((((.((((((.......))..)))).)))).))))..)))))))..

Structure
gau       ag    a    a    --  uu 
   gguaagu  auaa ucag aaga  cg  u
   |||||||  |||| |||| ||||  ||  a
   CCAUUCG  UAUU AGUC UUcu  gc  u
-cU       CA    C    C    uu  ua 


Annotation confidence Not enough data
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Genome context
supercont1.154: 420374-420437 [+]

Database links

Mature aae-miR-11893

Accession MIMAT0045989
Description Aedes aegypti aae-miR-11893 mature miRNA
Sequence 42 - UUCCUGACUUAUACGCUUACCU - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26914027
    Small RNA Profiling in Dengue Virus 2-Infected Aedes Mosquito Cells Reveals Viral piRNAs and Novel Host miRNAs
    Miesen P, Ivens A, Buck AH, van Rij RP
    PLoS Negl Trop Dis (2016) 10:e0004452