miRBase entry: aae-mir-11894b-1

Stem-loop aae-mir-11894b-1


Accession
MI0037930
Description
Aedes aegypti aae-mir-11894b-1 precursor miRNA

Literature search
1 open access papers mention aae-mir-11894b-1
(1 sentences)

Sequence

1027 reads, 52 reads per million, 2 experiments
gaugggucgucuugaaaugggaaagagugucaaucaucaucUUUACCAUUUCAAUAUGACCUAuu
((((((((((.(((((((((..(((((((.....)))..))))..))))))))).))))))))))

Structure
          c         ga    --   u 
gaugggucgu uugaaaugg  aaga  gug c
|||||||||| |||||||||  ||||  ||| a
uuAUCCAGUA AACUUUACC  UUcu  uac a
          U         AU    ac   u 


Annotation confidence Not enough data
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Genome context
supercont1.2335: 10435-10499 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from aae-mir-11894b-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature aae-miR-11894b

Accession MIMAT0045991
Description Aedes aegypti aae-miR-11894b mature miRNA
Sequence 42 - UUUACCAUUUCAAUAUGACCUA - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26914027
    Small RNA Profiling in Dengue Virus 2-Infected Aedes Mosquito Cells Reveals Viral piRNAs and Novel Host miRNAs
    Miesen P, Ivens A, Buck AH, van Rij RP
    PLoS Negl Trop Dis (2016) 10:e0004452