Stem-loop sequence aae-mir-11895-1

Accession

MI0037932 (change log)

Description

Aedes aegypti miR-11895-1 stem-loop

Literature search

1 open access papers mention aae-mir-11895-1
(1 sentences)

Stem-loop

      a                      u gcau 
5' gau agcaggagugaaugcaugaguu g    u
   ||| |||||||||||||||||||||| |     
3' cua ucgucuucacuuacguacuuaa c    u
      g                      u aaag 

Deep sequencing

38238 reads, 1.8e+03 reads per million, 2 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (AaegL1): supercont1.216: 1788475-1788540 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0037932

Mature sequence aae-miR-11895

• Accession: MIMAT0045992
• Sequence: 43 - uucaugcauucacuucugcuga - 64
• Deep sequencing: 71394 reads, 2 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:26914027 "Small RNA Profiling in Dengue Virus 2-Infected Aedes Mosquito Cells Reveals Viral piRNAs and Novel Host miRNAs" Miesen P, Ivens A, Buck AH, van Rij RP PLoS Negl Trop Dis. 10:e0004452(2016).