miRBase entry: pte-mir-263a

Stem-loop pte-mir-263a


Accession
MI0038027
Description
Parasteatoda tepidariorum pte-mir-263a precursor miRNA


Sequence

CUUGGCACUGUAAGAAUUCACAGAuggauaucaaaucGUGGAUUCUUUGGUGCUAAAGA
.(((((((((.((((((((((.(((.........))))))))))))))))))))))...

Structure
--C         U          A   gga 
   UUGGCACUG AAGAAUUCAC GAu   u
   ||||||||| |||||||||| |||   a
   AAUCGUGGU UUCUUAGGUG cua   u
AGA         -          -   aac 


Annotation confidence Not enough data
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Genome context
Scf5bK3_537.1: 22595157-22595215 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from pte-mir-263a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pte-miR-263a-5p

Accession MIMAT0046107
Description Parasteatoda tepidariorum pte-miR-263a-5p mature miRNA
Sequence 1 - CUUGGCACUGUAAGAAUUCACAGA - 24
Evidence experimental
Illumina [1]

Mature pte-miR-263a-3p

Accession MIMAT0046108
Description Parasteatoda tepidariorum pte-miR-263a-3p mature miRNA
Sequence 38 - GUGGAUUCUUUGGUGCUAAAGA - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27324919
    Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
    Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
    Genome Biol Evol (2016) 8:2133-2144