miRBase entry: pte-mir-11938

Stem-loop pte-mir-11938


Accession
MI0038051
Description
Parasteatoda tepidariorum pte-mir-11938 precursor miRNA


Sequence

UGUCUAAGAAGUUUAAGUGUCCagugcauaaugaaccagGCAUCUUUACUUCUCAGACAUA
(((((.((((((..(((((((..((.........))..)))).))).)))))).)))))..

Structure
--     A      UU   -    Ca  gca 
  UGUCU AGAAGU  AAG UGUC  gu   u
  ||||| ||||||  ||| ||||  ||   a
  ACAGA UCUUCA  UUC ACGg  ca   a
AU     C      -U   U    ac  agu 


Annotation confidence Not enough data
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Genome context
Scf5bK3_479: 10328885-10328945 [+]

Database links

Mature pte-miR-11938-5p

Accession MIMAT0046152
Description Parasteatoda tepidariorum pte-miR-11938-5p mature miRNA
Sequence 1 - UGUCUAAGAAGUUUAAGUGUCC - 22
Evidence experimental
Illumina [1]

Mature pte-miR-11938-3p

Accession MIMAT0046153
Description Parasteatoda tepidariorum pte-miR-11938-3p mature miRNA
Sequence 40 - GCAUCUUUACUUCUCAGACAUA - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27324919
    Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
    Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
    Genome Biol Evol (2016) 8:2133-2144