Stem-loop sequence pte-mir-3931

Accession

MI0038090 (change log)

Description

Parasteatoda tepidariorum miR-3931 stem-loop

Literature search

1 open access papers mention pte-mir-3931
(2 sentences)

Stem-loop

   --                u a   c   au 
5'   auuuguaccgauucaa g uag uuu  a
     |||||||||||||||| | ||| |||   
3'   uaagcauggcugaguu c auc aag  a
   ac                u -   a   ca 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates: Scf5bK3_112: 4859479-4859537 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0038090

Mature sequence pte-miR-3931-5p

• Accession: MIMAT0046215
• Sequence: 1 - auuuguaccgauucaaugauagcu - 24
• Evidence: experimental; Illumina [1]

Mature sequence pte-miR-3931-3p

• Accession: MIMAT0046216
• Sequence: 38 - uacuuugagucgguacgaauca - 59
• Evidence: experimental; Illumina [1]

References

1. PMID:27324919 "Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum" Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP Genome Biol Evol. 8:2133-2144(2016).