miRBase entry: pte-mir-11944

Stem-loop pte-mir-11944


Accession
MI0038118
Description
Parasteatoda tepidariorum pte-mir-11944 precursor miRNA


Sequence

CCUCGAACUCUACAUGGCGCCAauacuuucagauauuGGCGCCAUGUAGUGUUCGCGGAC
((.(((((.((((((((((((((((........)))))))))))))))).))))).))..

Structure
--  U     U                cuu 
  CC CGAAC CUACAUGGCGCCAaua   u
  || ||||| ||||||||||||||||    
  GG GCUUG GAUGUACCGCGGuuau   c
CA  C     U                aga 


Annotation confidence Not enough data
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Genome context
Scf5bK3_265: 5658206-5658265 [+]

Database links

Mature pte-miR-11944-5p

Accession MIMAT0046266
Description Parasteatoda tepidariorum pte-miR-11944-5p mature miRNA
Sequence 1 - CCUCGAACUCUACAUGGCGCCA - 22
Evidence experimental
Illumina [1]

Mature pte-miR-11944-3p

Accession MIMAT0046267
Description Parasteatoda tepidariorum pte-miR-11944-3p mature miRNA
Sequence 38 - GGCGCCAUGUAGUGUUCGCGGAC - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27324919
    Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
    Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
    Genome Biol Evol (2016) 8:2133-2144