miRBase entry: pte-mir-11958

Stem-loop pte-mir-11958


Accession
MI0038137
Description
Parasteatoda tepidariorum pte-mir-11958 precursor miRNA


Sequence

GAUGGUUGACUCCGGUUAUCcgagaucccagagAAAACCGGAGUCAUCCCUCUUU
((.((.(((((((((((.(((.........).)).))))))))))).)).))...

Structure
---  U  U           A  - gag 
   GA GG UGACUCCGGUU UC c   a
   || || ||||||||||| || |   u
   CU CC ACUGAGGCCAA Ag g   c
UUU  C  U           A  a acc 


Annotation confidence Not enough data
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Genome context
Scf5bK3_230: 10866971-10867025 [-]

Database links

Mature pte-miR-11958-5p

Accession MIMAT0046300
Description Parasteatoda tepidariorum pte-miR-11958-5p mature miRNA
Sequence 1 - GAUGGUUGACUCCGGUUAUC - 20
Evidence experimental
Illumina [1]

Mature pte-miR-11958-3p

Accession MIMAT0046301
Description Parasteatoda tepidariorum pte-miR-11958-3p mature miRNA
Sequence 34 - AAAACCGGAGUCAUCCCUCUUU - 55
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27324919
    Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
    Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
    Genome Biol Evol (2016) 8:2133-2144