miRBase entry: pte-mir-11965-2

Stem-loop pte-mir-11965-2


Accession
MI0038152
Description
Parasteatoda tepidariorum pte-mir-11965-2 precursor miRNA


Sequence

GAUGAAGGAAUUUGUGUUCAUaguuacauaUGAACACAAAUUCCUUCAUCUC
((((((((((((((((((((((......))))))))))))))))))))))..

Structure
--                      gu 
  GAUGAAGGAAUUUGUGUUCAUa  u
  ||||||||||||||||||||||   
  CUACUUCCUUAAACACAAGUau  a
CU                      ac 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Scf5bK3_401: 1568889-1568940 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from pte-mir-11965-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pte-miR-11965-3p

Accession MIMAT0046317
Description Parasteatoda tepidariorum pte-miR-11965-3p mature miRNA
Sequence 31 - UGAACACAAAUUCCUUCAUCUC - 52
Evidence experimental
Illumina [1]

Mature pte-miR-11965-2-5p

Accession MIMAT0046325
Description Parasteatoda tepidariorum pte-miR-11965-2-5p mature miRNA
Sequence 1 - GAUGAAGGAAUUUGUGUUCAU - 21
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27324919
    Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
    Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
    Genome Biol Evol (2016) 8:2133-2144