Stem-loop sequence bta-mir-2285at-2

Accession

MI0038166 (change log)

Description

Bos taurus miR-2285at-2 stem-loop

Literature search

11 open access papers mention bta-mir-2285at-2
(15 sentences)

Stem-loop

   --        a   a         gcucu 
5'   aaaaguuc uuc gguuuuucu     a
     |||||||| ||| |||||||||      
3'   uuuucaag aag ccaaaaagg     u
   gu        g   c         uaauc 

Deep sequencing

522 reads, 18.1 reads per million, 72 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Btau_5.0.1; GCA_000003205.6): chr28: 5355072-5355129 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0038166

Mature sequence bta-miR-2285at

• Accession: MIMAT0046342
• Sequence: 38 - aaaacccgaaggaacuuuuug - 58
• Deep sequencing: 164 reads, 20 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:27100870 "Comparative Analysis of the miRNome of Bovine Milk Fat, Whey and Cells" Li R, Dudemaine PL, Zhao X, Lei C, Ibeagha-Awemu EM PLoS One. 11:e0154129(2016).