miRBase entry: bta-mir-11974

Stem-loop bta-mir-11974


Accession
MI0038176
Description
Bos taurus bta-mir-11974 precursor miRNA


Sequence

1 reads, 1 reads per million, 1 experiments
uguggggggcgugcaggggccggggaagcugucaaggacccAGCACCUGCUGUGUCCCCCACAGC
(((((((((((.(((((.((.(((....((....))..))).)).)))))..)))))))))))..

Structure
--           -u     g  c   gaag  g 
  uguggggggcg  gcagg gc ggg    cu u
  |||||||||||  ||||| || |||    ||  
  ACACCCCCUGU  CGUCC CG ccc    ga c
CG           GU     A  A   --ag  a 


Annotation confidence Not enough data
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Genome context
chr16: 51943891-51943955 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from bta-mir-11974
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-11974

Accession MIMAT0046353
Description Bos taurus bta-miR-11974 mature miRNA
Sequence 42 - AGCACCUGCUGUGUCCCCCACAGC - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27100870
    Comparative Analysis of the miRNome of Bovine Milk Fat, Whey and Cells
    Li R, Dudemaine PL, Zhao X, Lei C, Ibeagha-Awemu EM
    PLoS One (2016) 11:e0154129