miRBase entry: bta-mir-11975

Stem-loop bta-mir-11975


Accession
MI0038177
Description
Bos taurus bta-mir-11975 precursor miRNA


Sequence

272 reads, 340 reads per million, 43 experiments
GGCGGCGGCGGCGCCGGGGCaucgccggggcgggagcgggagcucggccgccccgcaagccgacccggggggcgcaggccgguag
(.((((.(((.(.((.(((..((((((((((((((((....))))..))))))))...).)))))).)).).)))..)))).)..

Structure
-- G    -G   G G  G   Ca   - ---        --    g 
  G CGGC  GCG C CC GGG  ucg c   cggggcgg  gagc g
  | ||||  ||| | || |||  ||| |   ||||||||  ||||  
  u gccg  cgc g gg ccc  agc g   gccccgcc  cucg g
ga g    ga   g g  g   --   c aac        gg    a 


Annotation confidence Not enough data
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Genome context
chr16: 26895098-26895182 [+]

Database links

Mature bta-miR-11975

Accession MIMAT0046354
Description Bos taurus bta-miR-11975 mature miRNA
Sequence 1 - GGCGGCGGCGGCGCCGGGGC - 20
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27100870
    Comparative Analysis of the miRNome of Bovine Milk Fat, Whey and Cells
    Li R, Dudemaine PL, Zhao X, Lei C, Ibeagha-Awemu EM
    PLoS One (2016) 11:e0154129