miRBase entry: bta-mir-11988

Stem-loop bta-mir-11988


Accession
MI0038217
Description
Bos taurus bta-mir-11988 precursor miRNA


Sequence

34 reads, 7 reads per million, 14 experiments
uuccucccgccccccccccuuuuuagcagcuccccgaggcauguggaaucuuagugccugacuagggaAAGGGGACGACAGAGGAUGAGA
.(((((.((((((...((((................((((((..((...))..))))))....))))...)))).))...))))).....

Structure
----u     --c  -    ccc    uuuuagcagcuccccg      gu  a 
     uccuc   cg cccc   cccu                aggcau  gg  
     |||||   || ||||   ||||                ||||||  || a
     AGGAG   GC GGGG   ggga                uccgug  uc  
AGAGU     ACA  A    AAa    ------------ucag      au  u 


Annotation confidence Not enough data
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Genome context
chrX: 31127520-31127609 [-]

Database links

Mature bta-miR-11988

Accession MIMAT0046393
Description Bos taurus bta-miR-11988 mature miRNA
Sequence 69 - AAGGGGACGACAGAGGAUGAGA - 90
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27100870
    Comparative Analysis of the miRNome of Bovine Milk Fat, Whey and Cells
    Li R, Dudemaine PL, Zhao X, Lei C, Ibeagha-Awemu EM
    PLoS One (2016) 11:e0154129