miRBase entry: bta-mir-11998

Stem-loop bta-mir-11998


Accession
MI0038378
Description
Bos taurus bta-mir-11998 precursor miRNA


Sequence

76 reads, 6 reads per million, 36 experiments
uucccgggcaaggauacuagagaggguugccauuuccUUCUCUAGUGUGUUUUCCCAAC
.....(((.(((.(((((((((((((.........))))))))))))).))).)))...

Structure
uuccc   c   g             uug 
     ggg aag auacuagagaggg   c
     ||| ||| |||||||||||||   c
     CCC UUU UGUGAUCUCUUcc   a
--CAA   U   G             uuu 


Annotation confidence Not enough data
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Genome context
chr13: 34233014-34233072 [-]

Database links

Mature bta-miR-11998

Accession MIMAT0046654
Description Bos taurus bta-miR-11998 mature miRNA
Sequence 38 - UUCUCUAGUGUGUUUUCCCAAC - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26519053
    Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil
    Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM
    BMC Genomics (2015) 16:884