miRBase entry: bta-mir-12017

Stem-loop bta-mir-12017


Accession
MI0038422
Description
Bos taurus bta-mir-12017 precursor miRNA


Sequence

5 reads, 3 reads per million, 5 experiments
ACAGAGGAGCUUUUGACAUGAACugaucuuuacauucaaguucaugucugagcuaaucaga
...((..(((((..((((((((((((.........)).)))))))))).)))))..))...

Structure
ACA  GG     UU          -  ucu 
   GA  AGCUU  GACAUGAACu ga   u
   ||  |||||  |||||||||| ||   u
   cu  ucgag  cuguacuuga cu   a
aga  aa     -u          a  uac 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr24: 54905569-54905629 [-]

Database links

Mature bta-miR-12017

Accession MIMAT0046697
Description Bos taurus bta-miR-12017 mature miRNA
Sequence 1 - ACAGAGGAGCUUUUGACAUGAAC - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26519053
    Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil
    Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM
    BMC Genomics (2015) 16:884