miRBase entry: bta-mir-12028

Stem-loop bta-mir-12028


Accession
MI0038447
Description
Bos taurus bta-mir-12028 precursor miRNA


Sequence

1 reads, 1 reads per million, 1 experiments
agcucggggcagaggucugugaccugcagggcaggagaacugaUGUCUGGGACCCCGAUUCUCU
...((((((((((.(((.((..(((((...)))))...)).))).))))...))))))......

Structure
---agc      ---    g   u  -ga     a 
      ucgggg   caga guc gu   ccugc  
      ||||||   |||| ||| ||   ||||| g
      AGCCCC   GUCU Uag ca   ggacg  
UCUCUU      AGG    G   u  aga     g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr13: 45124056-45124119 [+]

Database links

Mature bta-miR-12028

Accession MIMAT0046721
Description Bos taurus bta-miR-12028 mature miRNA
Sequence 44 - UGUCUGGGACCCCGAUUCUCU - 64
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26519053
    Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil
    Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM
    BMC Genomics (2015) 16:884